CovidCTNet: An Open-Source Deep Learning Approach to Identify Covid-19
Using CT Image
CovidCTNet: An Open-Source Deep Learning Approach to Identify Covid-19 Using CT Image
Tahereh Javaheri†,1, Morteza Homayounfar†,2, Zohreh Amoozgar†,3, Reza Reiazi†,4,5,6, Fatemeh Homayounieh7, Engy Abbas8, Azadeh Laali9, Amir Reza Radmard10, Mohammad Hadi Gharib11, Seyed Ali Javad Mousavi12, Omid Ghaemi10, Rosa Babaei13, Hadi Karimi Mobin13, Mehdi Hosseinzadeh14,15, Rana Jahanban-Esfahanl16, Khaled Seidi16, Mannudeep K. Kalra7, Guanglan Zhang1,17, L.T. Chitkushev1,17, Benjamin Haibe-Kains4,5,18,19,20, Reza Malekzadeh21, Reza Rawassizadeh‡,1,17

Abstract
Coronavirus disease 2019 (Covid-19) is highly contagious with limitedtreatment options. Early and accurate diagnosis of Covid-19 is crucial inreducing the spread of the disease and its accompanied mortality. Currently,detection by reverse transcriptase polymerase chain reaction (RT-PCR) is thegold standard of outpatient and inpatient detection of Covid-19. RT-PCR is arapid method, however, its accuracy in detection is only ~70-75%. Anotherapproved strategy is computed tomography (CT) imaging. CT imaging has a muchhigher sensitivity of ~80-98%, but similar accuracy of 70%. To enhance theaccuracy of CT imaging detection, we developed an open-source set of algorithmscalled CovidCTNet that successfully differentiates Covid-19 fromcommunity-acquired pneumonia (CAP) and other lung diseases. CovidCTNetincreases the accuracy of CT imaging detection to 90% compared to radiologists(70%). The model is designed to work with heterogeneous and small sample sizesindependent of the CT imaging hardware. In order to facilitate the detection ofCovid-19 globally and assist radiologists and physicians in the screeningprocess, we are releasing all algorithms and parametric details in anopen-source format. Open-source sharing of our CovidCTNet enables developers torapidly improve and optimize services, while preserving user privacy and dataownership.
Code Repositories
Benchmarks
| Benchmark | Methodology | Metrics |
|---|---|---|
| covid-19-diagnosis-on | CovidCTNet | 10 fold Cross validation: 90 |
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